samtools-legacy
Tools for manipulating next-generation sequencing data
Samtools implements various utilities for post-processing alignments in the SAM, BAM, and CRAM formats, including indexing, variant calling (in conjunction with bcftools), and a simple alignment viewer. This is the legacy version which does not use the HTSlib and is required by some software.
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The following distributions are not officially supported. Use these packages at your own risk.